Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.52■□□□□ 0.88
Cnga4Q3UW12 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cnga4Q3UW12 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cnga4Q3UW12 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
Cnga4Q3UW12 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cnga4Q3UW12 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cnga4Q3UW12 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnga4Q3UW12 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cnga4Q3UW12 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnga4Q3UW12 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnga4Q3UW12 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnga4Q3UW12 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cnga4Q3UW12 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnga4Q3UW12 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnga4Q3UW12 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cnga4Q3UW12 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cnga4Q3UW12 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnga4Q3UW12 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cnga4Q3UW12 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Cnga4Q3UW12 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnga4Q3UW12 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnga4Q3UW12 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnga4Q3UW12 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cnga4Q3UW12 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnga4Q3UW12 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.47■□□□□ 0.87
Cnga4Q3UW12 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnga4Q3UW12 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnga4Q3UW12 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.45■□□□□ 0.86
Cnga4Q3UW12 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnga4Q3UW12 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnga4Q3UW12 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnga4Q3UW12 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cnga4Q3UW12 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cnga4Q3UW12 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cnga4Q3UW12 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cnga4Q3UW12 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cnga4Q3UW12 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.43■□□□□ 0.86
Cnga4Q3UW12 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnga4Q3UW12 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnga4Q3UW12 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cnga4Q3UW12 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnga4Q3UW12 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnga4Q3UW12 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.4■□□□□ 0.86
Cnga4Q3UW12 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnga4Q3UW12 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnga4Q3UW12 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnga4Q3UW12 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms