Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Gm43017-201ENSMUST00000198296 752 ntBASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf223Q3UV31 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.7■□□□□ 0.74
Rnf223Q3UV31 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf223Q3UV31 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Gm43173-201ENSMUST00000202246 593 ntBASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf223Q3UV31 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf223Q3UV31 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Rnf223Q3UV31 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Rnf223Q3UV31 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf223Q3UV31 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.68■□□□□ 0.74
Rnf223Q3UV31 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.67■□□□□ 0.74
Rnf223Q3UV31 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Spcs1-204ENSMUST00000226782 949 ntBASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf223Q3UV31 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf223Q3UV31 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf223Q3UV31 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf223Q3UV31 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf223Q3UV31 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf223Q3UV31 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Rnf223Q3UV31 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.65■□□□□ 0.74
Rnf223Q3UV31 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf223Q3UV31 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf223Q3UV31 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf223Q3UV31 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms