Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zfp560Q3URI6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Zfp560Q3URI6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Zfp560Q3URI6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zfp560Q3URI6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp560Q3URI6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp560Q3URI6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Zfp560Q3URI6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.24■□□□□ 0.83
Zfp560Q3URI6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp560Q3URI6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp560Q3URI6 Gm9847-201ENSMUST00000052528 599 ntBASIC20.24■□□□□ 0.83
Zfp560Q3URI6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp560Q3URI6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp560Q3URI6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp560Q3URI6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.23■□□□□ 0.83
Zfp560Q3URI6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.22■□□□□ 0.83
Zfp560Q3URI6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp560Q3URI6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp560Q3URI6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zfp560Q3URI6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Zfp560Q3URI6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.18■□□□□ 0.82
Zfp560Q3URI6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp560Q3URI6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.18■□□□□ 0.82
Zfp560Q3URI6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp560Q3URI6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp560Q3URI6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp560Q3URI6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms