Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa3Q3UPR0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa3Q3UPR0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shisa3Q3UPR0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shisa3Q3UPR0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa3Q3UPR0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shisa3Q3UPR0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.45■□□□□ 0.38
Shisa3Q3UPR0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa3Q3UPR0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa3Q3UPR0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa3Q3UPR0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa3Q3UPR0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa3Q3UPR0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa3Q3UPR0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa3Q3UPR0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa3Q3UPR0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Shisa3Q3UPR0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shisa3Q3UPR0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa3Q3UPR0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa3Q3UPR0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.38■□□□□ 0.37
Shisa3Q3UPR0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa3Q3UPR0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa3Q3UPR0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa3Q3UPR0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa3Q3UPR0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa3Q3UPR0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa3Q3UPR0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.37■□□□□ 0.37
Shisa3Q3UPR0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.37■□□□□ 0.37
Shisa3Q3UPR0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa3Q3UPR0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms