Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnrc6aQ3UHK8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Gm7291-201ENSMUST00000199147 382 ntBASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnrc6aQ3UHK8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Smad6-203ENSMUST00000179458 273 ntBASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.94■□□□□ 0.62
Tnrc6aQ3UHK8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnrc6aQ3UHK8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnrc6aQ3UHK8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tnrc6aQ3UHK8 Gm37179-201ENSMUST00000194862 823 ntBASIC18.91■□□□□ 0.62
Tnrc6aQ3UHK8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.91■□□□□ 0.62
Tnrc6aQ3UHK8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc6aQ3UHK8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnrc6aQ3UHK8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Gm27405-201ENSMUST00000184201 112 ntBASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnrc6aQ3UHK8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tnrc6aQ3UHK8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.89■□□□□ 0.61
Tnrc6aQ3UHK8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Tnrc6aQ3UHK8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Tnrc6aQ3UHK8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnrc6aQ3UHK8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Tnrc6aQ3UHK8 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.87■□□□□ 0.61
Tnrc6aQ3UHK8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tnrc6aQ3UHK8 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.87■□□□□ 0.61
Tnrc6aQ3UHK8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnrc6aQ3UHK8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnrc6aQ3UHK8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnrc6aQ3UHK8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnrc6aQ3UHK8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms