Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Xrra1Q3U3V8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrra1Q3U3V8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Xrra1Q3U3V8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrra1Q3U3V8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrra1Q3U3V8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrra1Q3U3V8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrra1Q3U3V8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.28■□□□□ 0.68
Xrra1Q3U3V8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrra1Q3U3V8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrra1Q3U3V8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Xrra1Q3U3V8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Xrra1Q3U3V8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrra1Q3U3V8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrra1Q3U3V8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrra1Q3U3V8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Xrra1Q3U3V8 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.25■□□□□ 0.67
Xrra1Q3U3V8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrra1Q3U3V8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Golph3-202ENSMUST00000226517 2359 ntBASIC19.24■□□□□ 0.67
Xrra1Q3U3V8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrra1Q3U3V8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrra1Q3U3V8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrra1Q3U3V8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrra1Q3U3V8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrra1Q3U3V8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrra1Q3U3V8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Xrra1Q3U3V8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrra1Q3U3V8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Xrra1Q3U3V8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Gm7143-201ENSMUST00000222811 859 ntBASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Gm9870-201ENSMUST00000063874 645 ntBASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrra1Q3U3V8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrra1Q3U3V8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrra1Q3U3V8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrra1Q3U3V8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Xrra1Q3U3V8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
Xrra1Q3U3V8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms