Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3KNL4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Q3KNL4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3KNL4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3KNL4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3KNL4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Q3KNL4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Q3KNL4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3KNL4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Q3KNL4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Q3KNL4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Q3KNL4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.79■□□□□ 0.76
Q3KNL4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Q3KNL4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3KNL4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3KNL4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.78■□□□□ 0.76
Q3KNL4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.78■□□□□ 0.76
Q3KNL4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Q3KNL4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3KNL4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3KNL4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3KNL4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3KNL4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Q3KNL4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.77■□□□□ 0.76
Q3KNL4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.77■□□□□ 0.76
Q3KNL4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.77■□□□□ 0.76
Q3KNL4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.77■□□□□ 0.76
Q3KNL4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3KNL4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Q3KNL4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Q3KNL4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Q3KNL4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Q3KNL4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q3KNL4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q3KNL4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Q3KNL4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.76■□□□□ 0.75
Q3KNL4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Q3KNL4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q3KNL4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Q3KNL4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Q3KNL4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q3KNL4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Q3KNL4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3KNL4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3KNL4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Q3KNL4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3KNL4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.75■□□□□ 0.75
Q3KNL4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.75■□□□□ 0.75
Q3KNL4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3KNL4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.75■□□□□ 0.75
Q3KNL4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q3KNL4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Q3KNL4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Q3KNL4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.74■□□□□ 0.75
Q3KNL4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Q3KNL4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
Q3KNL4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.74■□□□□ 0.75
Q3KNL4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3KNL4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Q3KNL4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms