Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.19□□□□□ -0.62
Ush2AQ2QI47 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Ush2AQ2QI47 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ush2AQ2QI47 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ush2AQ2QI47 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ush2AQ2QI47 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ush2AQ2QI47 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Gm6576-201ENSMUST00000169678 883 ntBASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Gm27275-201ENSMUST00000184318 272 ntBASIC11.18□□□□□ -0.62
Ush2AQ2QI47 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ush2AQ2QI47 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Gm10517-202ENSMUST00000192970 758 ntBASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ush2AQ2QI47 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Gm7367-201ENSMUST00000057611 492 ntBASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Gm6420-201ENSMUST00000193885 723 ntBASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.16□□□□□ -0.62
Ush2AQ2QI47 Gm11249-201ENSMUST00000117071 859 ntBASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Gm6433-201ENSMUST00000118634 875 ntBASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Gm10231-201ENSMUST00000181584 441 ntBASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Gm10175-202ENSMUST00000208752 441 ntBASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ush2AQ2QI47 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ush2AQ2QI47 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ush2AQ2QI47 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ush2AQ2QI47 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.15□□□□□ -0.63
Ush2AQ2QI47 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ush2AQ2QI47 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Ush2AQ2QI47 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.14□□□□□ -0.63
Ush2AQ2QI47 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.14□□□□□ -0.63
Ush2AQ2QI47 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.14□□□□□ -0.63
Ush2AQ2QI47 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms