Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pkd1l3Q2EG98 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1l3Q2EG98 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pkd1l3Q2EG98 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Pkd1l3Q2EG98 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1l3Q2EG98 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pkd1l3Q2EG98 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pkd1l3Q2EG98 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pkd1l3Q2EG98 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Gm26833-201ENSMUST00000180899 440 ntBASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1l3Q2EG98 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pkd1l3Q2EG98 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pkd1l3Q2EG98 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pkd1l3Q2EG98 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.09■□□□□ 0.49
Pkd1l3Q2EG98 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pkd1l3Q2EG98 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms