Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd3Q0EEE2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd3Q0EEE2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.44■□□□□ 0.7
Ptchd3Q0EEE2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd3Q0EEE2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd3Q0EEE2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ptchd3Q0EEE2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd3Q0EEE2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd3Q0EEE2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.43■□□□□ 0.7
Ptchd3Q0EEE2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd3Q0EEE2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd3Q0EEE2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd3Q0EEE2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd3Q0EEE2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd3Q0EEE2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd3Q0EEE2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms