Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad1P70340 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad1P70340 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Smad1P70340 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad1P70340 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Smad1P70340 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad1P70340 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad1P70340 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.7■□□□□ 0.9
Smad1P70340 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad1P70340 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad1P70340 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad1P70340 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad1P70340 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.69■□□□□ 0.9
Smad1P70340 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smad1P70340 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smad1P70340 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smad1P70340 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad1P70340 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
Smad1P70340 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.68■□□□□ 0.9
Smad1P70340 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.68■□□□□ 0.9
Smad1P70340 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.68■□□□□ 0.9
Smad1P70340 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smad1P70340 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad1P70340 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smad1P70340 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.67■□□□□ 0.9
Smad1P70340 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.67■□□□□ 0.9
Smad1P70340 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.67■□□□□ 0.9
Smad1P70340 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.67■□□□□ 0.9
Smad1P70340 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.67■□□□□ 0.9
Smad1P70340 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Smad1P70340 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad1P70340 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smad1P70340 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smad1P70340 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smad1P70340 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.66■□□□□ 0.9
Smad1P70340 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smad1P70340 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smad1P70340 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.65■□□□□ 0.9
Smad1P70340 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.65■□□□□ 0.9
Smad1P70340 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smad1P70340 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Smad1P70340 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smad1P70340 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad1P70340 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.64■□□□□ 0.89
Smad1P70340 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad1P70340 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Smad1P70340 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Smad1P70340 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smad1P70340 Gm12821-201ENSMUST00000120022 600 ntBASIC20.63■□□□□ 0.89
Smad1P70340 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.63■□□□□ 0.89
Smad1P70340 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.63■□□□□ 0.89
Smad1P70340 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smad1P70340 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad1P70340 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.62■□□□□ 0.89
Smad1P70340 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.62■□□□□ 0.89
Smad1P70340 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.62■□□□□ 0.89
Smad1P70340 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Smad1P70340 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad1P70340 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smad1P70340 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms