Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.11□□□□□ -0.47
Rps28P62858 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC12.11□□□□□ -0.47
Rps28P62858 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rps28P62858 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.11□□□□□ -0.47
Rps28P62858 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rps28P62858 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rps28P62858 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC12.1□□□□□ -0.47
Rps28P62858 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.1□□□□□ -0.47
Rps28P62858 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rps28P62858 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rps28P62858 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rps28P62858 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Rps28P62858 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rps28P62858 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.09□□□□□ -0.47
Rps28P62858 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Rps28P62858 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rps28P62858 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rps28P62858 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rps28P62858 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rps28P62858 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rps28P62858 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Rps28P62858 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.08□□□□□ -0.48
Rps28P62858 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rps28P62858 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Gm42418-201ENSMUST00000182010 1831 ntBASIC12.08□□□□□ -0.48
Rps28P62858 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rps28P62858 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rps28P62858 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rps28P62858 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Rps28P62858 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC12.07□□□□□ -0.48
Rps28P62858 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC12.07□□□□□ -0.48
Rps28P62858 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rps28P62858 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rps28P62858 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rps28P62858 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rps28P62858 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.06□□□□□ -0.48
Rps28P62858 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Rps28P62858 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rps28P62858 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms