Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lsm6P62313 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.74■□□□□ 0.43
Lsm6P62313 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.74■□□□□ 0.43
Lsm6P62313 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Gm9870-201ENSMUST00000063874 645 ntBASIC17.74■□□□□ 0.43
Lsm6P62313 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm6P62313 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm6P62313 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm6P62313 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm6P62313 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Lsm6P62313 Gm9959-201ENSMUST00000068277 390 ntBASIC17.73■□□□□ 0.43
Lsm6P62313 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lsm6P62313 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm6P62313 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Lsm6P62313 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.72■□□□□ 0.43
Lsm6P62313 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lsm6P62313 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.72■□□□□ 0.43
Lsm6P62313 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm6P62313 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.72■□□□□ 0.43
Lsm6P62313 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm6P62313 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm6P62313 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.71■□□□□ 0.43
Lsm6P62313 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm6P62313 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm6P62313 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm6P62313 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lsm6P62313 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm6P62313 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm6P62313 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lsm6P62313 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm6P62313 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.7■□□□□ 0.42
Lsm6P62313 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lsm6P62313 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm6P62313 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm6P62313 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm6P62313 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lsm6P62313 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm6P62313 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm6P62313 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm6P62313 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm6P62313 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm6P62313 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm6P62313 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm6P62313 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm6P62313 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm6P62313 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm6P62313 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Lsm6P62313 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Lsm6P62313 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.67■□□□□ 0.42
Lsm6P62313 Gm45102-201ENSMUST00000207427 857 ntBASIC17.67■□□□□ 0.42
Lsm6P62313 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm6P62313 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm6P62313 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm6P62313 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Lsm6P62313 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
Lsm6P62313 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lsm6P62313 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm6P62313 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm6P62313 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.66■□□□□ 0.42
Lsm6P62313 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Lsm6P62313 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm6P62313 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.66■□□□□ 0.42
Lsm6P62313 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm6P62313 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.65■□□□□ 0.42
Lsm6P62313 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms