Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn2bP55271 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn2bP55271 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn2bP55271 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.41■□□□□ 0.7
Cdkn2bP55271 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn2bP55271 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cdkn2bP55271 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cdkn2bP55271 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cdkn2bP55271 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn2bP55271 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkn2bP55271 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkn2bP55271 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkn2bP55271 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdkn2bP55271 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkn2bP55271 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkn2bP55271 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cdkn2bP55271 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkn2bP55271 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Cdkn2bP55271 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkn2bP55271 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkn2bP55271 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.36■□□□□ 0.69
Cdkn2bP55271 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.36■□□□□ 0.69
Cdkn2bP55271 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn2bP55271 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms