Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.69■□□□□ 0.9
Ddx6P54823 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx6P54823 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Ddx6P54823 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx6P54823 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx6P54823 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx6P54823 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ddx6P54823 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx6P54823 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.69■□□□□ 0.9
Ddx6P54823 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.68■□□□□ 0.9
Ddx6P54823 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.68■□□□□ 0.9
Ddx6P54823 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.68■□□□□ 0.9
Ddx6P54823 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx6P54823 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ddx6P54823 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx6P54823 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx6P54823 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
Ddx6P54823 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.67■□□□□ 0.9
Ddx6P54823 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.67■□□□□ 0.9
Ddx6P54823 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Gm10493-201ENSMUST00000097270 612 ntBASIC20.67■□□□□ 0.9
Ddx6P54823 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx6P54823 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx6P54823 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx6P54823 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx6P54823 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx6P54823 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx6P54823 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx6P54823 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx6P54823 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ddx6P54823 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Ddx6P54823 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx6P54823 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx6P54823 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Ddx6P54823 Gm40848-201ENSMUST00000221998 324 ntBASIC20.65■□□□□ 0.9
Ddx6P54823 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx6P54823 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx6P54823 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx6P54823 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx6P54823 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx6P54823 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx6P54823 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.64■□□□□ 0.89
Ddx6P54823 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx6P54823 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.64■□□□□ 0.89
Ddx6P54823 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx6P54823 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx6P54823 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx6P54823 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ddx6P54823 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx6P54823 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.63■□□□□ 0.89
Ddx6P54823 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ddx6P54823 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Ddx6P54823 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.63■□□□□ 0.89
Ddx6P54823 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx6P54823 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx6P54823 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx6P54823 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx6P54823 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx6P54823 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx6P54823 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.62■□□□□ 0.89
Ddx6P54823 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx6P54823 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx6P54823 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.62■□□□□ 0.89
Ddx6P54823 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx6P54823 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
Ddx6P54823 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.61■□□□□ 0.89
Ddx6P54823 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ddx6P54823 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx6P54823 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx6P54823 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx6P54823 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx6P54823 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ddx6P54823 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx6P54823 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx6P54823 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.6■□□□□ 0.89
Ddx6P54823 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ddx6P54823 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx6P54823 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx6P54823 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx6P54823 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx6P54823 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ddx6P54823 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.59■□□□□ 0.89
Ddx6P54823 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx6P54823 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx6P54823 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx6P54823 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx6P54823 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx6P54823 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx6P54823 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx6P54823 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx6P54823 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx6P54823 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms