Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Atxn1P54254 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atxn1P54254 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atxn1P54254 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Atxn1P54254 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Atxn1P54254 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Atxn1P54254 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atxn1P54254 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atxn1P54254 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.06■□□□□ 0.8
Atxn1P54254 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atxn1P54254 AV356131-201ENSMUST00000206201 750 ntBASIC20.06■□□□□ 0.8
Atxn1P54254 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Atxn1P54254 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atxn1P54254 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atxn1P54254 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.05■□□□□ 0.8
Atxn1P54254 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atxn1P54254 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atxn1P54254 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.05■□□□□ 0.8
Atxn1P54254 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.05■□□□□ 0.8
Atxn1P54254 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.04■□□□□ 0.8
Atxn1P54254 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Atxn1P54254 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atxn1P54254 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atxn1P54254 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atxn1P54254 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Atxn1P54254 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.04■□□□□ 0.8
Atxn1P54254 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atxn1P54254 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atxn1P54254 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atxn1P54254 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.03■□□□□ 0.8
Atxn1P54254 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.03■□□□□ 0.8
Atxn1P54254 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.03■□□□□ 0.8
Atxn1P54254 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atxn1P54254 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atxn1P54254 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atxn1P54254 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atxn1P54254 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atxn1P54254 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Atxn1P54254 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atxn1P54254 Gm10033-202ENSMUST00000211874 928 ntBASIC20.02■□□□□ 0.8
Atxn1P54254 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atxn1P54254 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atxn1P54254 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Atxn1P54254 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Atxn1P54254 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atxn1P54254 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Atxn1P54254 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atxn1P54254 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atxn1P54254 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Atxn1P54254 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atxn1P54254 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.01■□□□□ 0.79
Atxn1P54254 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.01■□□□□ 0.79
Atxn1P54254 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Atxn1P54254 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.01■□□□□ 0.79
Atxn1P54254 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Atxn1P54254 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Atxn1P54254 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atxn1P54254 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atxn1P54254 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atxn1P54254 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atxn1P54254 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atxn1P54254 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atxn1P54254 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atxn1P54254 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atxn1P54254 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atxn1P54254 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Atxn1P54254 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atxn1P54254 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Atxn1P54254 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Atxn1P54254 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atxn1P54254 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Atxn1P54254 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.98■□□□□ 0.79
Atxn1P54254 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Atxn1P54254 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.98■□□□□ 0.79
Atxn1P54254 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Atxn1P54254 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Atxn1P54254 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atxn1P54254 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
Atxn1P54254 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atxn1P54254 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atxn1P54254 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.97■□□□□ 0.79
Atxn1P54254 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atxn1P54254 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.97■□□□□ 0.79
Atxn1P54254 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atxn1P54254 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atxn1P54254 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Atxn1P54254 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Atxn1P54254 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atxn1P54254 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.96■□□□□ 0.79
Atxn1P54254 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atxn1P54254 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Atxn1P54254 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms