Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Golph3-202ENSMUST00000226517 2359 ntBASIC18.97■□□□□ 0.63
CntfP51642 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.97■□□□□ 0.63
CntfP51642 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CntfP51642 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CntfP51642 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CntfP51642 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CntfP51642 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.96■□□□□ 0.63
CntfP51642 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CntfP51642 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.96■□□□□ 0.63
CntfP51642 Gm5921-201ENSMUST00000075898 882 ntBASIC18.96■□□□□ 0.63
CntfP51642 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CntfP51642 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 Gm43566-201ENSMUST00000196851 808 ntBASIC18.95■□□□□ 0.62
CntfP51642 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.95■□□□□ 0.62
CntfP51642 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CntfP51642 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.95■□□□□ 0.62
CntfP51642 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.94■□□□□ 0.62
CntfP51642 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CntfP51642 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CntfP51642 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CntfP51642 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CntfP51642 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.93■□□□□ 0.62
CntfP51642 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CntfP51642 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CntfP51642 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CntfP51642 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CntfP51642 Iqck-206ENSMUST00000208658 2891 ntBASIC18.93■□□□□ 0.62
CntfP51642 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CntfP51642 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CntfP51642 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
CntfP51642 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.92■□□□□ 0.62
CntfP51642 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
CntfP51642 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CntfP51642 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CntfP51642 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Gm13238-201ENSMUST00000117655 780 ntBASIC18.91■□□□□ 0.62
CntfP51642 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CntfP51642 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CntfP51642 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CntfP51642 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CntfP51642 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CntfP51642 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CntfP51642 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CntfP51642 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CntfP51642 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.89■□□□□ 0.61
CntfP51642 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CntfP51642 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CntfP51642 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CntfP51642 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CntfP51642 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CntfP51642 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
CntfP51642 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CntfP51642 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CntfP51642 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CntfP51642 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CntfP51642 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CntfP51642 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CntfP51642 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CntfP51642 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.87■□□□□ 0.61
CntfP51642 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CntfP51642 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CntfP51642 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
CntfP51642 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CntfP51642 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CntfP51642 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CntfP51642 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms