Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.42■□□□□ 0.7
Rph3aP47708 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rph3aP47708 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rph3aP47708 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rph3aP47708 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rph3aP47708 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.42■□□□□ 0.7
Rph3aP47708 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rph3aP47708 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rph3aP47708 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rph3aP47708 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rph3aP47708 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rph3aP47708 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rph3aP47708 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.4■□□□□ 0.7
Rph3aP47708 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Rph3aP47708 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rph3aP47708 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rph3aP47708 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Rph3aP47708 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Rph3aP47708 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rph3aP47708 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rph3aP47708 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rph3aP47708 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rph3aP47708 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rph3aP47708 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rph3aP47708 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Rph3aP47708 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rph3aP47708 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rph3aP47708 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rph3aP47708 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.38■□□□□ 0.69
Rph3aP47708 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.38■□□□□ 0.69
Rph3aP47708 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.38■□□□□ 0.69
Rph3aP47708 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rph3aP47708 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rph3aP47708 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rph3aP47708 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rph3aP47708 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rph3aP47708 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Rph3aP47708 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.37■□□□□ 0.69
Rph3aP47708 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.37■□□□□ 0.69
Rph3aP47708 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rph3aP47708 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Rph3aP47708 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.36■□□□□ 0.69
Rph3aP47708 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.36■□□□□ 0.69
Rph3aP47708 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rph3aP47708 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.35■□□□□ 0.69
Rph3aP47708 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.35■□□□□ 0.69
Rph3aP47708 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rph3aP47708 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Rph3aP47708 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.34■□□□□ 0.69
Rph3aP47708 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rph3aP47708 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rph3aP47708 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rph3aP47708 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rph3aP47708 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.34■□□□□ 0.69
Rph3aP47708 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rph3aP47708 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rph3aP47708 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rph3aP47708 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rph3aP47708 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.34■□□□□ 0.69
Rph3aP47708 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rph3aP47708 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.33■□□□□ 0.68
Rph3aP47708 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.33■□□□□ 0.68
Rph3aP47708 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rph3aP47708 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
Rph3aP47708 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rph3aP47708 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rph3aP47708 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rph3aP47708 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rph3aP47708 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rph3aP47708 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rph3aP47708 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rph3aP47708 Notumos-201ENSMUST00000151998 2659 ntBASIC19.32■□□□□ 0.68
Rph3aP47708 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Rph3aP47708 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rph3aP47708 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rph3aP47708 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms