Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.81■□□□□ 0.92
Msh2P43247 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.81■□□□□ 0.92
Msh2P43247 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.81■□□□□ 0.92
Msh2P43247 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.81■□□□□ 0.92
Msh2P43247 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msh2P43247 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Msh2P43247 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.8■□□□□ 0.92
Msh2P43247 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.8■□□□□ 0.92
Msh2P43247 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.8■□□□□ 0.92
Msh2P43247 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msh2P43247 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.8■□□□□ 0.92
Msh2P43247 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh2P43247 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh2P43247 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh2P43247 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh2P43247 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Msh2P43247 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Msh2P43247 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh2P43247 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Msh2P43247 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Msh2P43247 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh2P43247 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Msh2P43247 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh2P43247 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Msh2P43247 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh2P43247 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh2P43247 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Msh2P43247 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msh2P43247 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msh2P43247 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msh2P43247 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Msh2P43247 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msh2P43247 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.77■□□□□ 0.92
Msh2P43247 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Msh2P43247 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Msh2P43247 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.77■□□□□ 0.92
Msh2P43247 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Msh2P43247 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.77■□□□□ 0.91
Msh2P43247 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Msh2P43247 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Msh2P43247 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh2P43247 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.75■□□□□ 0.91
Msh2P43247 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh2P43247 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Msh2P43247 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.75■□□□□ 0.91
Msh2P43247 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh2P43247 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh2P43247 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh2P43247 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msh2P43247 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Msh2P43247 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.74■□□□□ 0.91
Msh2P43247 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh2P43247 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh2P43247 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh2P43247 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh2P43247 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Msh2P43247 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh2P43247 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Msh2P43247 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh2P43247 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh2P43247 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh2P43247 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msh2P43247 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.73■□□□□ 0.91
Msh2P43247 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh2P43247 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.73■□□□□ 0.91
Msh2P43247 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh2P43247 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.72■□□□□ 0.91
Msh2P43247 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.72■□□□□ 0.91
Msh2P43247 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms