Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-2P42586 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Nkx2-2P42586 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.61■□□□□ 0.57
Nkx2-2P42586 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx2-2P42586 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-2P42586 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.59■□□□□ 0.57
Nkx2-2P42586 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-2P42586 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-2P42586 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-2P42586 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nkx2-2P42586 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-2P42586 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-2P42586 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Nkx2-2P42586 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-2P42586 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-2P42586 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.58■□□□□ 0.56
Nkx2-2P42586 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-2P42586 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx2-2P42586 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Nkx2-2P42586 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nkx2-2P42586 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.56■□□□□ 0.56
Nkx2-2P42586 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-2P42586 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-2P42586 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.54■□□□□ 0.56
Nkx2-2P42586 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-2P42586 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-2P42586 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-2P42586 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-2P42586 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-2P42586 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.53■□□□□ 0.56
Nkx2-2P42586 Gm12922-201ENSMUST00000120626 809 ntBASIC18.53■□□□□ 0.56
Nkx2-2P42586 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-2P42586 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx2-2P42586 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nkx2-2P42586 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms