Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox6P40645 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sox6P40645 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox6P40645 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox6P40645 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox6P40645 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox6P40645 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox6P40645 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sox6P40645 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox6P40645 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sox6P40645 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox6P40645 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox6P40645 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sox6P40645 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.84■□□□□ 0.61
Sox6P40645 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sox6P40645 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sox6P40645 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox6P40645 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Sox6P40645 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox6P40645 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox6P40645 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.6
Sox6P40645 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sox6P40645 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sox6P40645 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sox6P40645 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.82■□□□□ 0.6
Sox6P40645 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.82■□□□□ 0.6
Sox6P40645 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.82■□□□□ 0.6
Sox6P40645 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox6P40645 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox6P40645 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Sox6P40645 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.81■□□□□ 0.6
Sox6P40645 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox6P40645 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Golph3-202ENSMUST00000226517 2359 ntBASIC18.81■□□□□ 0.6
Sox6P40645 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox6P40645 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox6P40645 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox6P40645 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox6P40645 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox6P40645 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox6P40645 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.8■□□□□ 0.6
Sox6P40645 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox6P40645 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
Sox6P40645 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.8■□□□□ 0.6
Sox6P40645 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sox6P40645 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sox6P40645 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Sox6P40645 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox6P40645 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.79■□□□□ 0.6
Sox6P40645 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox6P40645 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox6P40645 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox6P40645 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.78■□□□□ 0.6
Sox6P40645 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox6P40645 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox6P40645 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Sox6P40645 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sox6P40645 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox6P40645 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox6P40645 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sox6P40645 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sox6P40645 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Sox6P40645 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.76■□□□□ 0.59
Sox6P40645 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms