Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfbP31240 Gm10653-202ENSMUST00000139570 835 ntBASIC20.55■□□□□ 0.88
PdgfbP31240 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.55■□□□□ 0.88
PdgfbP31240 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PdgfbP31240 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfbP31240 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PdgfbP31240 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfbP31240 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PdgfbP31240 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.54■□□□□ 0.88
PdgfbP31240 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfbP31240 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PdgfbP31240 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfbP31240 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfbP31240 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfbP31240 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.54■□□□□ 0.88
PdgfbP31240 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.54■□□□□ 0.88
PdgfbP31240 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.53■□□□□ 0.88
PdgfbP31240 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.53■□□□□ 0.88
PdgfbP31240 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.53■□□□□ 0.88
PdgfbP31240 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.53■□□□□ 0.88
PdgfbP31240 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PdgfbP31240 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.53■□□□□ 0.88
PdgfbP31240 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfbP31240 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
PdgfbP31240 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.52■□□□□ 0.88
PdgfbP31240 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.52■□□□□ 0.88
PdgfbP31240 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfbP31240 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PdgfbP31240 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfbP31240 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfbP31240 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PdgfbP31240 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PdgfbP31240 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.51■□□□□ 0.87
PdgfbP31240 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PdgfbP31240 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.51■□□□□ 0.87
PdgfbP31240 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PdgfbP31240 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Reep4-203ENSMUST00000226563 1444 ntBASIC20.51■□□□□ 0.87
PdgfbP31240 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfbP31240 Gm13234-201ENSMUST00000120010 747 ntBASIC20.5■□□□□ 0.87
PdgfbP31240 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.5■□□□□ 0.87
PdgfbP31240 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.5■□□□□ 0.87
PdgfbP31240 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfbP31240 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfbP31240 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfbP31240 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PdgfbP31240 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfbP31240 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfbP31240 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfbP31240 Gm12441-201ENSMUST00000121806 588 ntBASIC20.49■□□□□ 0.87
PdgfbP31240 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfbP31240 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PdgfbP31240 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfbP31240 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfbP31240 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PdgfbP31240 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfbP31240 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfbP31240 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfbP31240 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfbP31240 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfbP31240 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.48■□□□□ 0.87
PdgfbP31240 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PdgfbP31240 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfbP31240 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.47■□□□□ 0.87
PdgfbP31240 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.47■□□□□ 0.87
PdgfbP31240 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.47■□□□□ 0.87
PdgfbP31240 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfbP31240 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfbP31240 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PdgfbP31240 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfbP31240 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.45■□□□□ 0.86
PdgfbP31240 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.45■□□□□ 0.86
PdgfbP31240 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfbP31240 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.45■□□□□ 0.86
PdgfbP31240 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfbP31240 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfbP31240 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfbP31240 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.44■□□□□ 0.86
PdgfbP31240 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfbP31240 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.44■□□□□ 0.86
PdgfbP31240 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfbP31240 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfbP31240 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfbP31240 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfbP31240 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms