Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.69■□□□□ 0.58
Nedd8P29595 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd8P29595 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.68■□□□□ 0.58
Nedd8P29595 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd8P29595 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd8P29595 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd8P29595 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd8P29595 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nedd8P29595 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Golph3-205ENSMUST00000228671 2842 ntBASIC18.67■□□□□ 0.58
Nedd8P29595 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nedd8P29595 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nedd8P29595 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.66■□□□□ 0.58
Nedd8P29595 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nedd8P29595 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
Nedd8P29595 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nedd8P29595 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nedd8P29595 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Nedd8P29595 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nedd8P29595 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nedd8P29595 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nedd8P29595 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.65■□□□□ 0.58
Nedd8P29595 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.65■□□□□ 0.58
Nedd8P29595 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Nedd8P29595 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nedd8P29595 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nedd8P29595 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nedd8P29595 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nedd8P29595 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nedd8P29595 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Nedd8P29595 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Nedd8P29595 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nedd8P29595 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nedd8P29595 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.63■□□□□ 0.57
Nedd8P29595 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.63■□□□□ 0.57
Nedd8P29595 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.63■□□□□ 0.57
Nedd8P29595 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.63■□□□□ 0.57
Nedd8P29595 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.63■□□□□ 0.57
Nedd8P29595 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nedd8P29595 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nedd8P29595 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nedd8P29595 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.63■□□□□ 0.57
Nedd8P29595 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Nedd8P29595 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nedd8P29595 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nedd8P29595 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nedd8P29595 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nedd8P29595 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Nedd8P29595 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.61■□□□□ 0.57
Nedd8P29595 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.61■□□□□ 0.57
Nedd8P29595 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nedd8P29595 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms