Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.94■□□□□ 0.3
Col8a2P25318 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.94■□□□□ 0.3
Col8a2P25318 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.94■□□□□ 0.3
Col8a2P25318 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Gm43530-201ENSMUST00000195920 274 ntBASIC16.93■□□□□ 0.3
Col8a2P25318 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col8a2P25318 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.92■□□□□ 0.3
Col8a2P25318 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.92■□□□□ 0.3
Col8a2P25318 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.92■□□□□ 0.3
Col8a2P25318 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col8a2P25318 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col8a2P25318 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col8a2P25318 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col8a2P25318 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Gm12251-201ENSMUST00000117893 792 ntBASIC16.91■□□□□ 0.3
Col8a2P25318 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.91■□□□□ 0.3
Col8a2P25318 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.91■□□□□ 0.3
Col8a2P25318 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.91■□□□□ 0.3
Col8a2P25318 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.91■□□□□ 0.3
Col8a2P25318 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.91■□□□□ 0.3
Col8a2P25318 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col8a2P25318 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Col8a2P25318 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.9■□□□□ 0.3
Col8a2P25318 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Serp2-204ENSMUST00000228055 705 ntBASIC16.9■□□□□ 0.3
Col8a2P25318 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col8a2P25318 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.9■□□□□ 0.3
Col8a2P25318 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col8a2P25318 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col8a2P25318 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Col8a2P25318 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col8a2P25318 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col8a2P25318 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Col8a2P25318 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col8a2P25318 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col8a2P25318 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col8a2P25318 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col8a2P25318 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col8a2P25318 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col8a2P25318 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Col8a2P25318 Mir7075-201ENSMUST00000184187 82 ntBASIC16.88■□□□□ 0.29
Col8a2P25318 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.88■□□□□ 0.29
Col8a2P25318 Gm6139-201ENSMUST00000079261 882 ntBASIC16.88■□□□□ 0.29
Col8a2P25318 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col8a2P25318 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col8a2P25318 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.87■□□□□ 0.29
Col8a2P25318 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.87■□□□□ 0.29
Col8a2P25318 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col8a2P25318 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col8a2P25318 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col8a2P25318 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col8a2P25318 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col8a2P25318 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col8a2P25318 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.86■□□□□ 0.29
Col8a2P25318 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col8a2P25318 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.86■□□□□ 0.29
Col8a2P25318 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Col8a2P25318 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col8a2P25318 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms