Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Gm43530-201ENSMUST00000195920 274 ntBASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf1bP25119 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.71■□□□□ 0.59
Tnfrsf1bP25119 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Tnfrsf1bP25119 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf1bP25119 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf1bP25119 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf1bP25119 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tnfrsf1bP25119 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Gm21956-201ENSMUST00000179946 522 ntBASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf1bP25119 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf1bP25119 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf1bP25119 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tnfrsf1bP25119 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf1bP25119 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf1bP25119 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Tnfrsf1bP25119 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf1bP25119 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf1bP25119 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf1bP25119 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf1bP25119 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf1bP25119 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf1bP25119 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms