Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cbx3P23198 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cbx3P23198 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cbx3P23198 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cbx3P23198 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cbx3P23198 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Cbx3P23198 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cbx3P23198 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cbx3P23198 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cbx3P23198 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cbx3P23198 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cbx3P23198 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.24■□□□□ 0.51
Cbx3P23198 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.23■□□□□ 0.51
Cbx3P23198 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cbx3P23198 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.22■□□□□ 0.51
Cbx3P23198 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cbx3P23198 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cbx3P23198 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cbx3P23198 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cbx3P23198 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.21■□□□□ 0.51
Cbx3P23198 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cbx3P23198 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cbx3P23198 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cbx3P23198 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cbx3P23198 Gm9812-201ENSMUST00000061934 968 ntBASIC18.21■□□□□ 0.51
Cbx3P23198 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cbx3P23198 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cbx3P23198 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cbx3P23198 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
Cbx3P23198 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.2■□□□□ 0.5
Cbx3P23198 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Cbx3P23198 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.2■□□□□ 0.5
Cbx3P23198 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cbx3P23198 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cbx3P23198 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cbx3P23198 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.19■□□□□ 0.5
Cbx3P23198 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cbx3P23198 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cbx3P23198 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.19■□□□□ 0.5
Cbx3P23198 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cbx3P23198 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cbx3P23198 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.19■□□□□ 0.5
Cbx3P23198 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cbx3P23198 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.18■□□□□ 0.5
Cbx3P23198 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cbx3P23198 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cbx3P23198 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.17■□□□□ 0.5
Cbx3P23198 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cbx3P23198 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cbx3P23198 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.17■□□□□ 0.5
Cbx3P23198 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Cbx3P23198 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.17■□□□□ 0.5
Cbx3P23198 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.16■□□□□ 0.5
Cbx3P23198 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cbx3P23198 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cbx3P23198 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cbx3P23198 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms