Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.36■□□□□ 0.69
BdnfP21237 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BdnfP21237 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BdnfP21237 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BdnfP21237 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.35■□□□□ 0.69
BdnfP21237 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BdnfP21237 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BdnfP21237 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
BdnfP21237 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.35■□□□□ 0.69
BdnfP21237 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
BdnfP21237 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BdnfP21237 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
BdnfP21237 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BdnfP21237 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BdnfP21237 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BdnfP21237 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BdnfP21237 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BdnfP21237 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BdnfP21237 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.34■□□□□ 0.69
BdnfP21237 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.34■□□□□ 0.69
BdnfP21237 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.34■□□□□ 0.69
BdnfP21237 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BdnfP21237 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BdnfP21237 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
BdnfP21237 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
BdnfP21237 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
BdnfP21237 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BdnfP21237 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BdnfP21237 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BdnfP21237 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BdnfP21237 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
BdnfP21237 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BdnfP21237 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BdnfP21237 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BdnfP21237 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.31■□□□□ 0.68
BdnfP21237 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BdnfP21237 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BdnfP21237 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BdnfP21237 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BdnfP21237 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BdnfP21237 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BdnfP21237 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.3■□□□□ 0.68
BdnfP21237 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.3■□□□□ 0.68
BdnfP21237 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BdnfP21237 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.3■□□□□ 0.68
BdnfP21237 Gm5921-201ENSMUST00000075898 882 ntBASIC19.3■□□□□ 0.68
BdnfP21237 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BdnfP21237 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BdnfP21237 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
BdnfP21237 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BdnfP21237 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BdnfP21237 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BdnfP21237 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.29■□□□□ 0.68
BdnfP21237 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BdnfP21237 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BdnfP21237 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BdnfP21237 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.28■□□□□ 0.68
BdnfP21237 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BdnfP21237 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BdnfP21237 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.27■□□□□ 0.68
BdnfP21237 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.27■□□□□ 0.68
BdnfP21237 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BdnfP21237 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BdnfP21237 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BdnfP21237 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BdnfP21237 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
BdnfP21237 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.27■□□□□ 0.67
BdnfP21237 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BdnfP21237 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BdnfP21237 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BdnfP21237 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BdnfP21237 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BdnfP21237 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
BdnfP21237 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.26■□□□□ 0.67
BdnfP21237 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BdnfP21237 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BdnfP21237 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Gm43566-201ENSMUST00000196851 808 ntBASIC19.25■□□□□ 0.67
BdnfP21237 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BdnfP21237 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BdnfP21237 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms