Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf9P20334 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf9P20334 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf9P20334 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf9P20334 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf9P20334 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf9P20334 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf9P20334 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf9P20334 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf9P20334 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf9P20334 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Gm8493-201ENSMUST00000196881 489 ntBASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf9P20334 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf9P20334 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Gm9870-201ENSMUST00000063874 645 ntBASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf9P20334 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Iqck-206ENSMUST00000208658 2891 ntBASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf9P20334 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms