Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccl1P10146 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ccl1P10146 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ccl1P10146 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.68■□□□□ 0.1
Ccl1P10146 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl1P10146 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccl1P10146 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Ccl1P10146 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccl1P10146 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccl1P10146 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl1P10146 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.66■□□□□ 0.1
Ccl1P10146 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccl1P10146 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl1P10146 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ccl1P10146 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccl1P10146 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.66■□□□□ 0.1
Ccl1P10146 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccl1P10146 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccl1P10146 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Ccl1P10146 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Gm8503-201ENSMUST00000118131 455 ntBASIC15.65■□□□□ 0.1
Ccl1P10146 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl1P10146 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ccl1P10146 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.64■□□□□ 0.1
Ccl1P10146 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ccl1P10146 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Ccl1P10146 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccl1P10146 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.64■□□□□ 0.09
Ccl1P10146 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.64■□□□□ 0.09
Ccl1P10146 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl1P10146 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
Ccl1P10146 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccl1P10146 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccl1P10146 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.63■□□□□ 0.09
Ccl1P10146 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccl1P10146 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl1P10146 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Ccl1P10146 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccl1P10146 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccl1P10146 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.62■□□□□ 0.09
Ccl1P10146 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccl1P10146 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl1P10146 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms