Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.81□□□□□ -0.04
P06328 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P06328 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
P06328 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P06328 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P06328 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P06328 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
P06328 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.8□□□□□ -0.04
P06328 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P06328 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P06328 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
P06328 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P06328 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.79□□□□□ -0.04
P06328 Gm13238-201ENSMUST00000117655 780 ntBASIC14.79□□□□□ -0.04
P06328 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.79□□□□□ -0.04
P06328 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
P06328 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
P06328 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P06328 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
P06328 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P06328 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.78□□□□□ -0.04
P06328 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P06328 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
P06328 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
P06328 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P06328 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.77□□□□□ -0.04
P06328 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
P06328 Gm43566-201ENSMUST00000196851 808 ntBASIC14.77□□□□□ -0.05
P06328 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.77□□□□□ -0.05
P06328 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P06328 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P06328 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P06328 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
P06328 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.76□□□□□ -0.05
P06328 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.76□□□□□ -0.05
P06328 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
P06328 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.76□□□□□ -0.05
P06328 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
P06328 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
P06328 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.75□□□□□ -0.05
P06328 Gm10399-202ENSMUST00000202768 748 ntBASIC14.75□□□□□ -0.05
P06328 Gm5921-201ENSMUST00000075898 882 ntBASIC14.75□□□□□ -0.05
P06328 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
P06328 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
P06328 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
P06328 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
P06328 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.74□□□□□ -0.05
P06328 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
P06328 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.74□□□□□ -0.05
P06328 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
P06328 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms