Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
P04213 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.46■□□□□ 0.71
P04213 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Gm5812-201ENSMUST00000061073 957 ntBASIC19.46■□□□□ 0.71
P04213 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04213 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04213 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04213 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04213 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
P04213 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.44■□□□□ 0.7
P04213 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04213 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04213 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04213 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04213 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
P04213 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04213 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04213 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
P04213 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04213 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04213 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04213 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
P04213 Gm7143-201ENSMUST00000222811 859 ntBASIC19.42■□□□□ 0.7
P04213 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.42■□□□□ 0.7
P04213 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04213 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
P04213 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
P04213 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04213 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
P04213 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
P04213 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.4■□□□□ 0.7
P04213 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Golph3-202ENSMUST00000226517 2359 ntBASIC19.4■□□□□ 0.7
P04213 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04213 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P04213 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P04213 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.39■□□□□ 0.69
P04213 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
P04213 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
P04213 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04213 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.38■□□□□ 0.69
P04213 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
P04213 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.38■□□□□ 0.69
P04213 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04213 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms