Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.3■□□□□ 0.36
H3f3cP02301 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3cP02301 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3cP02301 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3cP02301 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3cP02301 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.29■□□□□ 0.36
H3f3cP02301 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3cP02301 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
H3f3cP02301 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3cP02301 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3cP02301 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.29■□□□□ 0.36
H3f3cP02301 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.29■□□□□ 0.36
H3f3cP02301 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3cP02301 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3f3cP02301 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.28■□□□□ 0.36
H3f3cP02301 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3cP02301 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
H3f3cP02301 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3cP02301 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3cP02301 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3cP02301 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.28■□□□□ 0.36
H3f3cP02301 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.28■□□□□ 0.36
H3f3cP02301 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
H3f3cP02301 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3f3cP02301 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
H3f3cP02301 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3cP02301 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3cP02301 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3cP02301 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3cP02301 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3f3cP02301 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.27■□□□□ 0.36
H3f3cP02301 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
H3f3cP02301 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H3f3cP02301 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3cP02301 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3cP02301 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3cP02301 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.26■□□□□ 0.35
H3f3cP02301 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.26■□□□□ 0.35
H3f3cP02301 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
H3f3cP02301 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3cP02301 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3cP02301 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
H3f3cP02301 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3f3cP02301 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3cP02301 Gm12922-201ENSMUST00000120626 809 ntBASIC17.25■□□□□ 0.35
H3f3cP02301 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3cP02301 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.25■□□□□ 0.35
H3f3cP02301 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.25■□□□□ 0.35
H3f3cP02301 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
H3f3cP02301 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3f3cP02301 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3cP02301 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3cP02301 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.24■□□□□ 0.35
H3f3cP02301 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3cP02301 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3cP02301 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3f3cP02301 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
H3f3cP02301 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3f3cP02301 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.22■□□□□ 0.35
H3f3cP02301 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3cP02301 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3cP02301 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3cP02301 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.22■□□□□ 0.35
H3f3cP02301 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.22■□□□□ 0.35
H3f3cP02301 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3f3cP02301 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
H3f3cP02301 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.21■□□□□ 0.35
H3f3cP02301 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3cP02301 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.21■□□□□ 0.35
H3f3cP02301 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.21■□□□□ 0.35
H3f3cP02301 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3cP02301 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
H3f3cP02301 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3f3cP02301 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H3f3cP02301 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.2■□□□□ 0.34
H3f3cP02301 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.2■□□□□ 0.34
H3f3cP02301 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
H3f3cP02301 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3f3cP02301 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H3f3cP02301 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.19■□□□□ 0.34
H3f3cP02301 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
H3f3cP02301 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms