Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TcraP01849 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.69□□□□□ -0.06
TcraP01849 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TcraP01849 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TcraP01849 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.69□□□□□ -0.06
TcraP01849 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TcraP01849 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.68□□□□□ -0.06
TcraP01849 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.68□□□□□ -0.06
TcraP01849 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TcraP01849 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Gm9806-201ENSMUST00000051080 552 ntBASIC14.68□□□□□ -0.06
TcraP01849 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.68□□□□□ -0.06
TcraP01849 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TcraP01849 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TcraP01849 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TcraP01849 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TcraP01849 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TcraP01849 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TcraP01849 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TcraP01849 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.66□□□□□ -0.06
TcraP01849 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TcraP01849 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.66□□□□□ -0.06
TcraP01849 Gm11687-201ENSMUST00000118911 886 ntBASIC14.66□□□□□ -0.06
TcraP01849 Scarna2-201ENSMUST00000157560 414 ntBASIC14.66□□□□□ -0.06
TcraP01849 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TcraP01849 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.66□□□□□ -0.06
TcraP01849 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TcraP01849 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TcraP01849 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.65□□□□□ -0.06
TcraP01849 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.65□□□□□ -0.06
TcraP01849 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TcraP01849 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.65□□□□□ -0.07
TcraP01849 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.64□□□□□ -0.07
TcraP01849 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Gm44428-201ENSMUST00000204474 874 ntBASIC14.64□□□□□ -0.07
TcraP01849 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TcraP01849 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TcraP01849 Gm16437-201ENSMUST00000025669 507 ntBASIC14.63□□□□□ -0.07
TcraP01849 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TcraP01849 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TcraP01849 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.62□□□□□ -0.07
TcraP01849 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.62□□□□□ -0.07
TcraP01849 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms