Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp1O89090 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp1O89090 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.57■□□□□ 0.88
Sp1O89090 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sp1O89090 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sp1O89090 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.56■□□□□ 0.88
Sp1O89090 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.56■□□□□ 0.88
Sp1O89090 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sp1O89090 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sp1O89090 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sp1O89090 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.56■□□□□ 0.88
Sp1O89090 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sp1O89090 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sp1O89090 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
Sp1O89090 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.56■□□□□ 0.88
Sp1O89090 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sp1O89090 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.55■□□□□ 0.88
Sp1O89090 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.55■□□□□ 0.88
Sp1O89090 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.55■□□□□ 0.88
Sp1O89090 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.55■□□□□ 0.88
Sp1O89090 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sp1O89090 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.54■□□□□ 0.88
Sp1O89090 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sp1O89090 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sp1O89090 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Gm43017-201ENSMUST00000198296 752 ntBASIC20.54■□□□□ 0.88
Sp1O89090 Gm43173-201ENSMUST00000202246 593 ntBASIC20.54■□□□□ 0.88
Sp1O89090 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Sp1O89090 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sp1O89090 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
Sp1O89090 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.54■□□□□ 0.88
Sp1O89090 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sp1O89090 Spcs1-204ENSMUST00000226782 949 ntBASIC20.53■□□□□ 0.88
Sp1O89090 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sp1O89090 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sp1O89090 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sp1O89090 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sp1O89090 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Sp1O89090 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sp1O89090 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sp1O89090 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.52■□□□□ 0.88
Sp1O89090 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Sp1O89090 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.52■□□□□ 0.88
Sp1O89090 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.52■□□□□ 0.88
Sp1O89090 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sp1O89090 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Sp1O89090 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sp1O89090 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Sp1O89090 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sp1O89090 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.51■□□□□ 0.87
Sp1O89090 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sp1O89090 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sp1O89090 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sp1O89090 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sp1O89090 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sp1O89090 Mir6236-201ENSMUST00000184437 123 ntBASIC20.5■□□□□ 0.87
Sp1O89090 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.5■□□□□ 0.87
Sp1O89090 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.5■□□□□ 0.87
Sp1O89090 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Sp1O89090 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sp1O89090 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sp1O89090 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sp1O89090 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.49■□□□□ 0.87
Sp1O89090 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sp1O89090 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sp1O89090 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sp1O89090 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sp1O89090 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.49■□□□□ 0.87
Sp1O89090 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sp1O89090 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sp1O89090 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Sp1O89090 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.48■□□□□ 0.87
Sp1O89090 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sp1O89090 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms