Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.86■□□□□ 0.93
CopeO89079 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.85■□□□□ 0.93
CopeO89079 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CopeO89079 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CopeO89079 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CopeO89079 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CopeO89079 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CopeO89079 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CopeO89079 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CopeO89079 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CopeO89079 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CopeO89079 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CopeO89079 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CopeO89079 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CopeO89079 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CopeO89079 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.83■□□□□ 0.93
CopeO89079 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CopeO89079 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CopeO89079 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CopeO89079 Mir6538-201ENSMUST00000183713 110 ntBASIC20.82■□□□□ 0.92
CopeO89079 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CopeO89079 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CopeO89079 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.82■□□□□ 0.92
CopeO89079 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CopeO89079 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.82■□□□□ 0.92
CopeO89079 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CopeO89079 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CopeO89079 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CopeO89079 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CopeO89079 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.81■□□□□ 0.92
CopeO89079 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
CopeO89079 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CopeO89079 Iqck-206ENSMUST00000208658 2891 ntBASIC20.81■□□□□ 0.92
CopeO89079 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CopeO89079 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CopeO89079 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CopeO89079 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CopeO89079 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CopeO89079 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.8■□□□□ 0.92
CopeO89079 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CopeO89079 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CopeO89079 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CopeO89079 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CopeO89079 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CopeO89079 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.79■□□□□ 0.92
CopeO89079 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CopeO89079 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CopeO89079 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CopeO89079 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CopeO89079 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.79■□□□□ 0.92
CopeO89079 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CopeO89079 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CopeO89079 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CopeO89079 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CopeO89079 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CopeO89079 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CopeO89079 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CopeO89079 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CopeO89079 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CopeO89079 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CopeO89079 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.77■□□□□ 0.92
CopeO89079 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CopeO89079 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.77■□□□□ 0.92
CopeO89079 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CopeO89079 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CopeO89079 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CopeO89079 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CopeO89079 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CopeO89079 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.76■□□□□ 0.91
CopeO89079 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CopeO89079 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CopeO89079 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CopeO89079 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CopeO89079 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CopeO89079 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CopeO89079 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.75■□□□□ 0.91
CopeO89079 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopeO89079 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CopeO89079 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms