Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Syn1O88935 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
Syn1O88935 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.94■□□□□ 0.94
Syn1O88935 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Syn1O88935 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syn1O88935 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.93■□□□□ 0.94
Syn1O88935 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syn1O88935 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syn1O88935 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Syn1O88935 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Syn1O88935 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.93■□□□□ 0.94
Syn1O88935 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Syn1O88935 Gm11421-201ENSMUST00000122124 294 ntBASIC20.93■□□□□ 0.94
Syn1O88935 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Syn1O88935 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syn1O88935 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syn1O88935 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syn1O88935 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syn1O88935 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syn1O88935 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Syn1O88935 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Syn1O88935 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syn1O88935 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Syn1O88935 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syn1O88935 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syn1O88935 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syn1O88935 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syn1O88935 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.91■□□□□ 0.94
Syn1O88935 Gm20760-201ENSMUST00000179197 648 ntBASIC20.91■□□□□ 0.94
Syn1O88935 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.91■□□□□ 0.94
Syn1O88935 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Syn1O88935 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Syn1O88935 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syn1O88935 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syn1O88935 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.9■□□□□ 0.94
Syn1O88935 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Syn1O88935 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syn1O88935 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Syn1O88935 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syn1O88935 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syn1O88935 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syn1O88935 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syn1O88935 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syn1O88935 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syn1O88935 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syn1O88935 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.88■□□□□ 0.93
Syn1O88935 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Syn1O88935 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syn1O88935 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.88■□□□□ 0.93
Syn1O88935 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syn1O88935 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syn1O88935 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Syn1O88935 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syn1O88935 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.87■□□□□ 0.93
Syn1O88935 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syn1O88935 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syn1O88935 Gm8520-201ENSMUST00000186517 868 ntBASIC20.87■□□□□ 0.93
Syn1O88935 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syn1O88935 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syn1O88935 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Syn1O88935 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.87■□□□□ 0.93
Syn1O88935 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.86■□□□□ 0.93
Syn1O88935 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.86■□□□□ 0.93
Syn1O88935 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.86■□□□□ 0.93
Syn1O88935 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Syn1O88935 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Syn1O88935 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.85■□□□□ 0.93
Syn1O88935 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.85■□□□□ 0.93
Syn1O88935 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Syn1O88935 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syn1O88935 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms