Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn1O88704 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn1O88704 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn1O88704 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn1O88704 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.24■□□□□ 0.67
Hcn1O88704 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.24■□□□□ 0.67
Hcn1O88704 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Hcn1O88704 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn1O88704 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn1O88704 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.23■□□□□ 0.67
Hcn1O88704 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.23■□□□□ 0.67
Hcn1O88704 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.23■□□□□ 0.67
Hcn1O88704 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.23■□□□□ 0.67
Hcn1O88704 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Hcn1O88704 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hcn1O88704 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Hcn1O88704 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.22■□□□□ 0.67
Hcn1O88704 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Hcn1O88704 Gm22238-201ENSMUST00000175222 88 ntBASIC19.22■□□□□ 0.67
Hcn1O88704 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.22■□□□□ 0.67
Hcn1O88704 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hcn1O88704 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hcn1O88704 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hcn1O88704 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hcn1O88704 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.21■□□□□ 0.67
Hcn1O88704 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hcn1O88704 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.21■□□□□ 0.67
Hcn1O88704 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hcn1O88704 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.21■□□□□ 0.67
Hcn1O88704 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hcn1O88704 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hcn1O88704 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hcn1O88704 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hcn1O88704 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hcn1O88704 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.2■□□□□ 0.66
Hcn1O88704 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.2■□□□□ 0.66
Hcn1O88704 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hcn1O88704 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.2■□□□□ 0.66
Hcn1O88704 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.2■□□□□ 0.66
Hcn1O88704 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hcn1O88704 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hcn1O88704 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hcn1O88704 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hcn1O88704 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hcn1O88704 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hcn1O88704 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn1O88704 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn1O88704 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hcn1O88704 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn1O88704 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hcn1O88704 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn1O88704 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn1O88704 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn1O88704 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hcn1O88704 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Hcn1O88704 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hcn1O88704 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hcn1O88704 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hcn1O88704 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms