Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Cldn2O88552 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn2O88552 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.71■□□□□ 0.91
Cldn2O88552 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.71■□□□□ 0.91
Cldn2O88552 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn2O88552 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn2O88552 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn2O88552 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Smad6-203ENSMUST00000179458 273 ntBASIC20.7■□□□□ 0.9
Cldn2O88552 Gm26571-201ENSMUST00000181399 666 ntBASIC20.7■□□□□ 0.9
Cldn2O88552 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Cldn2O88552 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Cldn2O88552 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.7■□□□□ 0.9
Cldn2O88552 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.7■□□□□ 0.9
Cldn2O88552 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn2O88552 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn2O88552 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn2O88552 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn2O88552 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.69■□□□□ 0.9
Cldn2O88552 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn2O88552 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cldn2O88552 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn2O88552 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn2O88552 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn2O88552 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.68■□□□□ 0.9
Cldn2O88552 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn2O88552 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.68■□□□□ 0.9
Cldn2O88552 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn2O88552 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn2O88552 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.68■□□□□ 0.9
Cldn2O88552 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cldn2O88552 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.68■□□□□ 0.9
Cldn2O88552 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn2O88552 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn2O88552 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn2O88552 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn2O88552 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn2O88552 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cldn2O88552 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.67■□□□□ 0.9
Cldn2O88552 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cldn2O88552 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.66■□□□□ 0.9
Cldn2O88552 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cldn2O88552 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn2O88552 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn2O88552 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.66■□□□□ 0.9
Cldn2O88552 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn2O88552 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn2O88552 Gm10493-201ENSMUST00000097270 612 ntBASIC20.66■□□□□ 0.9
Cldn2O88552 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn2O88552 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn2O88552 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cldn2O88552 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.65■□□□□ 0.9
Cldn2O88552 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn2O88552 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn2O88552 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Cldn2O88552 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn2O88552 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn2O88552 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.64■□□□□ 0.89
Cldn2O88552 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn2O88552 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn2O88552 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn2O88552 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cldn2O88552 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cldn2O88552 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cldn2O88552 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.63■□□□□ 0.89
Cldn2O88552 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.63■□□□□ 0.89
Cldn2O88552 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.63■□□□□ 0.89
Cldn2O88552 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn2O88552 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn2O88552 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cldn2O88552 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn2O88552 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cldn2O88552 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn2O88552 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn2O88552 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.62■□□□□ 0.89
Cldn2O88552 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.62■□□□□ 0.89
Cldn2O88552 Gm42569-201ENSMUST00000200539 472 ntBASIC20.62■□□□□ 0.89
Cldn2O88552 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms