Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn1O88551 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cldn1O88551 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn1O88551 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cldn1O88551 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn1O88551 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.28■□□□□ 0.36
Cldn1O88551 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn1O88551 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn1O88551 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn1O88551 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn1O88551 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn1O88551 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn1O88551 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn1O88551 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cldn1O88551 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.27■□□□□ 0.36
Cldn1O88551 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.27■□□□□ 0.36
Cldn1O88551 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn1O88551 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn1O88551 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn1O88551 Gm40848-201ENSMUST00000221998 324 ntBASIC17.27■□□□□ 0.36
Cldn1O88551 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cldn1O88551 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn1O88551 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.25■□□□□ 0.35
Cldn1O88551 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cldn1O88551 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cldn1O88551 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn1O88551 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cldn1O88551 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn1O88551 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.24■□□□□ 0.35
Cldn1O88551 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldn1O88551 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.24■□□□□ 0.35
Cldn1O88551 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn1O88551 Gm7143-201ENSMUST00000222811 859 ntBASIC17.24■□□□□ 0.35
Cldn1O88551 Spcs1-204ENSMUST00000226782 949 ntBASIC17.24■□□□□ 0.35
Cldn1O88551 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn1O88551 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cldn1O88551 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn1O88551 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn1O88551 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn1O88551 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn1O88551 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn1O88551 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn1O88551 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn1O88551 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.22■□□□□ 0.35
Cldn1O88551 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.22■□□□□ 0.35
Cldn1O88551 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn1O88551 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn1O88551 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn1O88551 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn1O88551 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cldn1O88551 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn1O88551 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn1O88551 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.21■□□□□ 0.35
Cldn1O88551 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.21■□□□□ 0.35
Cldn1O88551 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn1O88551 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cldn1O88551 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Cldn1O88551 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn1O88551 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn1O88551 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn1O88551 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cldn1O88551 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn1O88551 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cldn1O88551 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn1O88551 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn1O88551 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.2■□□□□ 0.34
Cldn1O88551 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.2■□□□□ 0.34
Cldn1O88551 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn1O88551 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn1O88551 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Cldn1O88551 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn1O88551 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn1O88551 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Cldn1O88551 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms