Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Gm37179-201ENSMUST00000194862 823 ntBASIC19.34■□□□□ 0.69
Tgfbr3O88393 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Tgfbr3O88393 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr3O88393 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tgfbr3O88393 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tgfbr3O88393 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.33■□□□□ 0.68
Tgfbr3O88393 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.33■□□□□ 0.68
Tgfbr3O88393 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr3O88393 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tgfbr3O88393 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr3O88393 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Gm18671-201ENSMUST00000214826 683 ntBASIC19.3■□□□□ 0.68
Tgfbr3O88393 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr3O88393 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.29■□□□□ 0.68
Tgfbr3O88393 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tgfbr3O88393 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Gm10033-202ENSMUST00000211874 928 ntBASIC19.28■□□□□ 0.68
Tgfbr3O88393 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tgfbr3O88393 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr3O88393 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tgfbr3O88393 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.26■□□□□ 0.67
Tgfbr3O88393 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.26■□□□□ 0.67
Tgfbr3O88393 AV356131-201ENSMUST00000206201 750 ntBASIC19.26■□□□□ 0.67
Tgfbr3O88393 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfbr3O88393 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfbr3O88393 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfbr3O88393 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tgfbr3O88393 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr3O88393 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.25■□□□□ 0.67
Tgfbr3O88393 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr3O88393 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr3O88393 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.25■□□□□ 0.67
Tgfbr3O88393 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms