Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh16O88338 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Cdh16O88338 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh16O88338 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cdh16O88338 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh16O88338 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh16O88338 Gm7332-201ENSMUST00000118351 454 ntBASIC19.72■□□□□ 0.75
Cdh16O88338 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh16O88338 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh16O88338 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh16O88338 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh16O88338 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Cdh16O88338 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.72■□□□□ 0.75
Cdh16O88338 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cdh16O88338 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.71■□□□□ 0.75
Cdh16O88338 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
Cdh16O88338 Mir6538-201ENSMUST00000183713 110 ntBASIC19.71■□□□□ 0.75
Cdh16O88338 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh16O88338 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cdh16O88338 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh16O88338 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdh16O88338 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh16O88338 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh16O88338 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh16O88338 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdh16O88338 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.68■□□□□ 0.74
Cdh16O88338 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh16O88338 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.68■□□□□ 0.74
Cdh16O88338 Gm12366-201ENSMUST00000121722 873 ntBASIC19.68■□□□□ 0.74
Cdh16O88338 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdh16O88338 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.68■□□□□ 0.74
Cdh16O88338 Gm5786-201ENSMUST00000085368 882 ntBASIC19.68■□□□□ 0.74
Cdh16O88338 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh16O88338 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdh16O88338 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh16O88338 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh16O88338 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.67■□□□□ 0.74
Cdh16O88338 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh16O88338 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh16O88338 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cdh16O88338 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh16O88338 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh16O88338 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh16O88338 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh16O88338 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdh16O88338 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdh16O88338 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdh16O88338 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdh16O88338 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh16O88338 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Cdh16O88338 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdh16O88338 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdh16O88338 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdh16O88338 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdh16O88338 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdh16O88338 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh16O88338 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cdh16O88338 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh16O88338 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh16O88338 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh16O88338 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms