Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pdlim1O70400 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.98■□□□□ 0.79
Pdlim1O70400 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim1O70400 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pdlim1O70400 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim1O70400 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Pdlim1O70400 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim1O70400 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim1O70400 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim1O70400 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim1O70400 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pdlim1O70400 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim1O70400 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim1O70400 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim1O70400 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pdlim1O70400 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim1O70400 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim1O70400 Mir6236-201ENSMUST00000184437 123 ntBASIC19.96■□□□□ 0.79
Pdlim1O70400 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim1O70400 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim1O70400 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.95■□□□□ 0.78
Pdlim1O70400 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.95■□□□□ 0.78
Pdlim1O70400 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdlim1O70400 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 Gm21956-201ENSMUST00000179946 522 ntBASIC19.94■□□□□ 0.78
Pdlim1O70400 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.94■□□□□ 0.78
Pdlim1O70400 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim1O70400 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pdlim1O70400 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.93■□□□□ 0.78
Pdlim1O70400 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim1O70400 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pdlim1O70400 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.92■□□□□ 0.78
Pdlim1O70400 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Pdlim1O70400 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim1O70400 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim1O70400 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim1O70400 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim1O70400 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.91■□□□□ 0.78
Pdlim1O70400 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.91■□□□□ 0.78
Pdlim1O70400 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.91■□□□□ 0.78
Pdlim1O70400 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim1O70400 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim1O70400 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pdlim1O70400 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pdlim1O70400 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
Pdlim1O70400 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.9■□□□□ 0.78
Pdlim1O70400 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim1O70400 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim1O70400 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim1O70400 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim1O70400 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim1O70400 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim1O70400 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pdlim1O70400 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim1O70400 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim1O70400 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pdlim1O70400 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms