Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Notumos-201ENSMUST00000151998 2659 ntBASIC19.79■□□□□ 0.76
Cbx4O55187 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx4O55187 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.79■□□□□ 0.76
Cbx4O55187 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx4O55187 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx4O55187 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx4O55187 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.79■□□□□ 0.76
Cbx4O55187 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Cbx4O55187 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx4O55187 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx4O55187 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx4O55187 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx4O55187 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx4O55187 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx4O55187 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx4O55187 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx4O55187 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Cbx4O55187 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.77■□□□□ 0.76
Cbx4O55187 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Cbx4O55187 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 Gm9870-201ENSMUST00000063874 645 ntBASIC19.76■□□□□ 0.75
Cbx4O55187 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.76■□□□□ 0.75
Cbx4O55187 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Cbx4O55187 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.76■□□□□ 0.75
Cbx4O55187 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cbx4O55187 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cbx4O55187 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cbx4O55187 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cbx4O55187 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cbx4O55187 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cbx4O55187 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cbx4O55187 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.74■□□□□ 0.75
Cbx4O55187 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cbx4O55187 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.74■□□□□ 0.75
Cbx4O55187 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx4O55187 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
Cbx4O55187 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cbx4O55187 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx4O55187 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx4O55187 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx4O55187 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.72■□□□□ 0.75
Cbx4O55187 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx4O55187 Gm22238-201ENSMUST00000175222 88 ntBASIC19.72■□□□□ 0.75
Cbx4O55187 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.71■□□□□ 0.75
Cbx4O55187 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cbx4O55187 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Cbx4O55187 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cbx4O55187 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cbx4O55187 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cbx4O55187 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.7■□□□□ 0.74
Cbx4O55187 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.7■□□□□ 0.74
Cbx4O55187 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.7■□□□□ 0.74
Cbx4O55187 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx4O55187 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Cbx4O55187 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.69■□□□□ 0.74
Cbx4O55187 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx4O55187 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cbx4O55187 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx4O55187 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.68■□□□□ 0.74
Cbx4O55187 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.68■□□□□ 0.74
Cbx4O55187 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx4O55187 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx4O55187 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx4O55187 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx4O55187 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Cbx4O55187 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx4O55187 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms