Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.61■□□□□ 0.73
Cacna1bO55017 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1bO55017 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.61■□□□□ 0.73
Cacna1bO55017 Gm11421-201ENSMUST00000122124 294 ntBASIC19.6■□□□□ 0.73
Cacna1bO55017 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cacna1bO55017 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cacna1bO55017 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1bO55017 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.6■□□□□ 0.73
Cacna1bO55017 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Cacna1bO55017 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cacna1bO55017 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1bO55017 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cacna1bO55017 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1bO55017 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.59■□□□□ 0.73
Cacna1bO55017 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.58■□□□□ 0.73
Cacna1bO55017 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1bO55017 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1bO55017 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1bO55017 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Cacna1bO55017 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cacna1bO55017 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1bO55017 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1bO55017 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cacna1bO55017 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1bO55017 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1bO55017 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1bO55017 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.57■□□□□ 0.72
Cacna1bO55017 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cacna1bO55017 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1bO55017 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.57■□□□□ 0.72
Cacna1bO55017 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1bO55017 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Cacna1bO55017 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1bO55017 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cacna1bO55017 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cacna1bO55017 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacna1bO55017 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cacna1bO55017 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1bO55017 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.56■□□□□ 0.72
Cacna1bO55017 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.56■□□□□ 0.72
Cacna1bO55017 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1bO55017 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1bO55017 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1bO55017 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacna1bO55017 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1bO55017 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1bO55017 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1bO55017 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacna1bO55017 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1bO55017 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1bO55017 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1bO55017 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cacna1bO55017 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.53■□□□□ 0.72
Cacna1bO55017 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1bO55017 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1bO55017 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1bO55017 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1bO55017 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1bO55017 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cacna1bO55017 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1bO55017 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cacna1bO55017 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1bO55017 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cacna1bO55017 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 655.4 ms