Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Cap2-205ENSMUST00000225824 1634 ntBASIC17.31■□□□□ 0.36
DffbO54788 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DffbO54788 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.3■□□□□ 0.36
DffbO54788 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.3■□□□□ 0.36
DffbO54788 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DffbO54788 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.29■□□□□ 0.36
DffbO54788 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DffbO54788 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DffbO54788 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.28■□□□□ 0.36
DffbO54788 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DffbO54788 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffbO54788 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffbO54788 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.28■□□□□ 0.36
DffbO54788 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffbO54788 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffbO54788 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DffbO54788 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DffbO54788 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.28■□□□□ 0.36
DffbO54788 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DffbO54788 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.27■□□□□ 0.36
DffbO54788 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffbO54788 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.27■□□□□ 0.36
DffbO54788 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DffbO54788 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DffbO54788 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DffbO54788 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DffbO54788 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DffbO54788 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DffbO54788 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DffbO54788 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
DffbO54788 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DffbO54788 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DffbO54788 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DffbO54788 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DffbO54788 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.27■□□□□ 0.35
DffbO54788 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DffbO54788 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.26■□□□□ 0.35
DffbO54788 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.26■□□□□ 0.35
DffbO54788 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DffbO54788 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.25■□□□□ 0.35
DffbO54788 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DffbO54788 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.25■□□□□ 0.35
DffbO54788 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.25■□□□□ 0.35
DffbO54788 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
DffbO54788 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DffbO54788 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DffbO54788 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.24■□□□□ 0.35
DffbO54788 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms