Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1O35604 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Npc1O35604 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1O35604 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Npc1O35604 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Npc1O35604 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.69■□□□□ 0.74
Npc1O35604 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.69■□□□□ 0.74
Npc1O35604 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.69■□□□□ 0.74
Npc1O35604 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1O35604 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Npc1O35604 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.68■□□□□ 0.74
Npc1O35604 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.68■□□□□ 0.74
Npc1O35604 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Npc1O35604 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Npc1O35604 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1O35604 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npc1O35604 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.67■□□□□ 0.74
Npc1O35604 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
Npc1O35604 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npc1O35604 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npc1O35604 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Npc1O35604 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.67■□□□□ 0.74
Npc1O35604 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npc1O35604 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Npc1O35604 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npc1O35604 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npc1O35604 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Npc1O35604 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.66■□□□□ 0.74
Npc1O35604 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.66■□□□□ 0.74
Npc1O35604 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Npc1O35604 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Npc1O35604 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npc1O35604 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npc1O35604 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npc1O35604 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npc1O35604 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npc1O35604 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Npc1O35604 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Npc1O35604 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.65■□□□□ 0.74
Npc1O35604 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Npc1O35604 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.65■□□□□ 0.74
Npc1O35604 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.64■□□□□ 0.73
Npc1O35604 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.64■□□□□ 0.73
Npc1O35604 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Npc1O35604 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Npc1O35604 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Npc1O35604 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.63■□□□□ 0.73
Npc1O35604 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Npc1O35604 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1O35604 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1O35604 Gm43530-201ENSMUST00000195920 274 ntBASIC19.62■□□□□ 0.73
Npc1O35604 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.62■□□□□ 0.73
Npc1O35604 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1O35604 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Npc1O35604 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1O35604 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1O35604 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1O35604 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1O35604 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.61■□□□□ 0.73
Npc1O35604 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Npc1O35604 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.6■□□□□ 0.73
Npc1O35604 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Npc1O35604 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Npc1O35604 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms