Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.39■□□□□ 0.69
Abca4O35600 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.39■□□□□ 0.69
Abca4O35600 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abca4O35600 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.38■□□□□ 0.69
Abca4O35600 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.38■□□□□ 0.69
Abca4O35600 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.38■□□□□ 0.69
Abca4O35600 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abca4O35600 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.37■□□□□ 0.69
Abca4O35600 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abca4O35600 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Abca4O35600 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abca4O35600 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abca4O35600 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abca4O35600 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Abca4O35600 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Abca4O35600 Trmt13-210ENSMUST00000198454 880 ntBASIC19.36■□□□□ 0.69
Abca4O35600 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abca4O35600 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abca4O35600 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.36■□□□□ 0.69
Abca4O35600 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abca4O35600 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.36■□□□□ 0.69
Abca4O35600 Gm10819-201ENSMUST00000099988 561 ntBASIC19.36■□□□□ 0.69
Abca4O35600 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abca4O35600 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.35■□□□□ 0.69
Abca4O35600 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abca4O35600 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abca4O35600 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abca4O35600 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Abca4O35600 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abca4O35600 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abca4O35600 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Abca4O35600 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Abca4O35600 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca4O35600 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca4O35600 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Abca4O35600 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.34■□□□□ 0.69
Abca4O35600 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.34■□□□□ 0.69
Abca4O35600 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Abca4O35600 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca4O35600 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.34■□□□□ 0.69
Abca4O35600 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca4O35600 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Abca4O35600 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.33■□□□□ 0.69
Abca4O35600 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abca4O35600 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abca4O35600 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Abca4O35600 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abca4O35600 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abca4O35600 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Abca4O35600 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Abca4O35600 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abca4O35600 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Abca4O35600 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.32■□□□□ 0.68
Abca4O35600 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Abca4O35600 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Gm6211-202ENSMUST00000167849 925 ntBASIC19.31■□□□□ 0.68
Abca4O35600 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abca4O35600 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.31■□□□□ 0.68
Abca4O35600 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Gm15565-201ENSMUST00000118890 427 ntBASIC19.3■□□□□ 0.68
Abca4O35600 Gm11643-201ENSMUST00000119578 864 ntBASIC19.3■□□□□ 0.68
Abca4O35600 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.3■□□□□ 0.68
Abca4O35600 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.3■□□□□ 0.68
Abca4O35600 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca4O35600 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca4O35600 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca4O35600 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Abca4O35600 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.3■□□□□ 0.68
Abca4O35600 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Abca4O35600 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca4O35600 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abca4O35600 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abca4O35600 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abca4O35600 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms