Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.1■□□□□ 0.33
Prrt1O35449 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt1O35449 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt1O35449 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt1O35449 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt1O35449 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt1O35449 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt1O35449 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt1O35449 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prrt1O35449 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prrt1O35449 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prrt1O35449 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prrt1O35449 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.08■□□□□ 0.32
Prrt1O35449 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prrt1O35449 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prrt1O35449 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.08■□□□□ 0.32
Prrt1O35449 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prrt1O35449 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.07■□□□□ 0.32
Prrt1O35449 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prrt1O35449 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prrt1O35449 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prrt1O35449 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prrt1O35449 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prrt1O35449 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.06■□□□□ 0.32
Prrt1O35449 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.06■□□□□ 0.32
Prrt1O35449 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prrt1O35449 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prrt1O35449 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prrt1O35449 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.05■□□□□ 0.32
Prrt1O35449 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.05■□□□□ 0.32
Prrt1O35449 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.05■□□□□ 0.32
Prrt1O35449 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Prrt1O35449 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Prrt1O35449 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.05■□□□□ 0.32
Prrt1O35449 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Prrt1O35449 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prrt1O35449 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.04■□□□□ 0.32
Prrt1O35449 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Prrt1O35449 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.04■□□□□ 0.32
Prrt1O35449 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prrt1O35449 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prrt1O35449 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prrt1O35449 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.03■□□□□ 0.32
Prrt1O35449 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prrt1O35449 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prrt1O35449 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prrt1O35449 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.03■□□□□ 0.32
Prrt1O35449 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.03■□□□□ 0.32
Prrt1O35449 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Prrt1O35449 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.03■□□□□ 0.32
Prrt1O35449 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prrt1O35449 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prrt1O35449 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prrt1O35449 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.02■□□□□ 0.32
Prrt1O35449 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prrt1O35449 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.02■□□□□ 0.31
Prrt1O35449 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prrt1O35449 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prrt1O35449 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prrt1O35449 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prrt1O35449 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prrt1O35449 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prrt1O35449 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms