Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gfra3O35118 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gfra3O35118 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.46■□□□□ 0.39
Gfra3O35118 Gm43137-201ENSMUST00000198052 594 ntBASIC17.46■□□□□ 0.39
Gfra3O35118 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gfra3O35118 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gfra3O35118 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gfra3O35118 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gfra3O35118 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.45■□□□□ 0.38
Gfra3O35118 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Gfra3O35118 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gfra3O35118 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gfra3O35118 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.45■□□□□ 0.38
Gfra3O35118 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gfra3O35118 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gfra3O35118 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gfra3O35118 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.44■□□□□ 0.38
Gfra3O35118 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.44■□□□□ 0.38
Gfra3O35118 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gfra3O35118 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gfra3O35118 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.44■□□□□ 0.38
Gfra3O35118 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.44■□□□□ 0.38
Gfra3O35118 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gfra3O35118 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Gfra3O35118 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gfra3O35118 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gfra3O35118 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gfra3O35118 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Gfra3O35118 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.42■□□□□ 0.38
Gfra3O35118 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.42■□□□□ 0.38
Gfra3O35118 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gfra3O35118 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gfra3O35118 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gfra3O35118 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.41■□□□□ 0.38
Gfra3O35118 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gfra3O35118 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.4■□□□□ 0.38
Gfra3O35118 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Gfra3O35118 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.4■□□□□ 0.38
Gfra3O35118 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.4■□□□□ 0.38
Gfra3O35118 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Gfra3O35118 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gfra3O35118 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Gfra3O35118 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gfra3O35118 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Gfra3O35118 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Gfra3O35118 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gfra3O35118 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gfra3O35118 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gfra3O35118 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gfra3O35118 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gfra3O35118 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.38■□□□□ 0.37
Gfra3O35118 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.38■□□□□ 0.37
Gfra3O35118 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gfra3O35118 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.38■□□□□ 0.37
Gfra3O35118 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gfra3O35118 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.38■□□□□ 0.37
Gfra3O35118 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.38■□□□□ 0.37
Gfra3O35118 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.38■□□□□ 0.37
Gfra3O35118 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.38■□□□□ 0.37
Gfra3O35118 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gfra3O35118 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms