Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ebf3O08791 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ebf3O08791 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.96■□□□□ 0.95
Ebf3O08791 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ebf3O08791 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.95■□□□□ 0.95
Ebf3O08791 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ebf3O08791 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ebf3O08791 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.95■□□□□ 0.94
Ebf3O08791 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ebf3O08791 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.95■□□□□ 0.94
Ebf3O08791 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ebf3O08791 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ebf3O08791 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ebf3O08791 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.95■□□□□ 0.94
Ebf3O08791 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.94■□□□□ 0.94
Ebf3O08791 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ebf3O08791 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ebf3O08791 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ebf3O08791 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
Ebf3O08791 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ebf3O08791 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ebf3O08791 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ebf3O08791 Gm43173-201ENSMUST00000202246 593 ntBASIC20.93■□□□□ 0.94
Ebf3O08791 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ebf3O08791 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ebf3O08791 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ebf3O08791 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ebf3O08791 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Ebf3O08791 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ebf3O08791 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ebf3O08791 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ebf3O08791 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.92■□□□□ 0.94
Ebf3O08791 Gm12251-201ENSMUST00000117893 792 ntBASIC20.92■□□□□ 0.94
Ebf3O08791 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ebf3O08791 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ebf3O08791 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Ebf3O08791 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ebf3O08791 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ebf3O08791 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ebf3O08791 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ebf3O08791 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ebf3O08791 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ebf3O08791 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.9■□□□□ 0.94
Ebf3O08791 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.9■□□□□ 0.94
Ebf3O08791 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
Ebf3O08791 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf3O08791 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Ebf3O08791 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ebf3O08791 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf3O08791 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf3O08791 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf3O08791 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf3O08791 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.88■□□□□ 0.93
Ebf3O08791 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ebf3O08791 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.88■□□□□ 0.93
Ebf3O08791 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf3O08791 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf3O08791 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf3O08791 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ebf3O08791 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf3O08791 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
Ebf3O08791 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf3O08791 Gm5874-201ENSMUST00000096101 508 ntBASIC20.87■□□□□ 0.93
Ebf3O08791 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ebf3O08791 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf3O08791 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf3O08791 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ebf3O08791 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf3O08791 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ebf3O08791 Gm43530-201ENSMUST00000195920 274 ntBASIC20.86■□□□□ 0.93
Ebf3O08791 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf3O08791 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ebf3O08791 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf3O08791 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms